Search results for "Metabolic pathway"

showing 10 items of 106 documents

Genetic determinants of seed protein plasticity in response to the environment in Medicago truncatula

2021

As the frequency of extreme environmental events is expected to increase with climate change, identifying candidate genes for stabilizing the protein composition of legume seeds or optimizing this in a given environment is increasingly important. To elucidate the genetic determinants of seed protein plasticity, major seed proteins from 200 ecotypes of Medicago truncatula grown in four contrasting environments were quantified after one-dimensional electrophoresis. The plasticity index of these proteins was recorded for each genotype as the slope of Finlay and Wilkinson's regression and then used for genome-wide association studies (GWASs), enabling the identification of candidate genes for d…

0106 biological sciences0301 basic medicineCandidate geneGenotypelegumesMutantVitamin UGenome-wide association studyPlant ScienceBiologymethionine recycling01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compoundMethionineStress PhysiologicalMedicago truncatulaGeneticsStorage protein[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyGenome-wide association studies (GWAS)GenePlant Proteins2. Zero hungerchemistry.chemical_classificationGeneticsMethionineSeed Storage Proteinsfood and beveragesGlobulinsCell Biologybiology.organism_classificationMedicago truncatulaMetabolic pathwayPhenotype030104 developmental biologychemistrystorage proteins13. Climate actionplasticityMutationSeedsseedGenome-Wide Association Study010606 plant biology & botany
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Defense Priming in Nicotiana tabacum Accelerates and Amplifies ‘New’ C/N Fluxes in Key Amino Acid Biosynthetic Pathways

2020

: In the struggle to survive herbivory by leaf-feeding insects, plants employ multiple strategies to defend themselves. One mechanism by which plants increase resistance is by intensifying their responsiveness in the production of certain defense agents to create a rapid response. Known as defense priming, this action can accelerate and amplify responses of metabolic pathways, providing plants with long-lasting resistance, especially when faced with waves of attack. In the work presented, short-lived radiotracers of carbon administered as 11CO2 and nitrogen administered as 13NH3 were applied in Nicotiana tabacum, to examine the temporal changes in &lsquo

0106 biological sciences0301 basic medicineNicotiana tabacumamino acid metabolismPlant Science01 natural sciencesplant insect herbivorySerine03 medical and health scienceschemistry.chemical_compoundBiosynthesislcsh:Botanynitrogen-13Shikimate pathwaycarbon-11Secondary metabolismEcology Evolution Behavior and SystematicsX-ray fluorescence imagingchemistry.chemical_classificationEcologybiologydefense primingJasmonic acidfungifood and beveragesbiology.organism_classificationlcsh:QK1-989Amino acidMetabolic pathway030104 developmental biologychemistryBiochemistryisotope ratio analysis010606 plant biology & botanyPlants
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Rhynchophorus ferrugineus attack affects a group of compounds rather than rearranging Phoenix canariensis metabolic pathways

2015

The red palm weevil (RPW; Rhynchophorus ferrugineus) is spreading worldwide and severely harming many palm species. However, most studies on RPW focused on insect biology, and little information is available about the plant response to the attack. In the present experiment, we used metabolomics to study the alteration of the leaf metabolome of Phoenix canariensis at initial (1st stage) or advanced (2nd stage) attack by RPW compared with healthy (unattacked) plants. The leaf metabolome significantly varied among treatments. At the 1st stage of attack, plants showed a reprogramming of carbohydrate and organic acid metabolism; in contrast, peptides and lipid metabolic pathways underwent more c…

0106 biological sciences0301 basic medicinePhenylpropanoidWeevilfood and beveragesPlant ScienceBiologybiology.organism_classification01 natural sciencesBiochemistryGeneral Biochemistry Genetics and Molecular BiologyTerpenoid03 medical and health sciencesMetabolic pathwayRhynchophorus030104 developmental biologyMetabolomicsBiochemistryPhoenix canariensisBotanyMetabolome010606 plant biology & botanyJournal of Integrative Plant Biology
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Comprehending and improving cannabis specialized metabolism in the systems biology era

2020

Cannabis sativa is a source of food, fiber and specialized metabolites such as cannabinoids, with psychoactive and pharmacological effects. Due to its expanding and increasingly-accepted use in medicine, cannabis cultivation is acquiring more importance and less social stigma. Humans initiated different domestication episodes whose later spread gave rise to a plethora of landrace cultivars. At present, breeders cross germplasms from different gene pools depending on their specific use. The fiber (hemp) and drug (marijuana) types of C. sativa differ in their cannabinoid chemical composition phenotype (chemotype) and also in the accumulation of terpenoid compounds that constitute a strain’s p…

0106 biological sciences0301 basic medicineSystems biologymedicine.medical_treatmentPlant ScienceComputational biology01 natural sciencesGenomeTerpene03 medical and health sciencesCannabinoid chemotypeGeneticsmedicineCannabisbiologyChemotypeCannabinoidsTerpenesSystems Biologyfood and beveragesGeneral Medicinebiology.organism_classificationTerpenoidMarijuanaPlant BreedingMetabolic pathway030104 developmental biologyCannabinoidCannabisHempAgronomy and Crop ScienceMetabolic Networks and Pathways010606 plant biology & botanyPlant Science
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The combined action of 9 lipoxygenase and galactolipase is sufficient to bring about programmed cell death during tobacco hypersensitive response

2005

International audience; Oxylipins, derived from fatty acid hydroperoxides (FAHs), are thought to play different roles during plant pathogen interactions. During hypersensitive response (HR) some of them serve as signals necessary for defence gene activation whereas others could contribute to pathogen killing or could participate in the execution of plant programmed cell death (PCD) associated with this resistance. In order to address the role of these compounds in the latter process, we have closely observed lipid peroxidation, the first step of this metabolic pathway, under different situations which led either to accelerated or inhibited HR cell death. The oxidative process has been studi…

0106 biological sciencesHypersensitive responseProgrammed cell deathPhysiologyPlant ScienceBiologyGALACTOLIPASE01 natural sciencesLipid peroxidation03 medical and health scienceschemistry.chemical_compoundLipoxygenaseRALSTONIA SOLANACEARUMGalactolipasePATATINUnsaturated fatty acid030304 developmental biologyHYPERSENSITIVE RESPONSE[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesTOBACCOfood and beveragesPROGRAMMED CELL DEATH[SDV.EE] Life Sciences [q-bio]/Ecology environmentMetabolic pathwayLIPID PEROXYDATIONBiochemistrychemistryApoptosisbiology.protein010606 plant biology & botany
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Genome Economization in the Endosymbiont of the Wood Roach Cryptocercus punctulatus Due to Drastic Loss of Amino Acid Synthesis Capabilities

2011

Cockroaches (Blattaria: Dictyoptera) harbor the endosymbiont Blattabacterium sp. in their abdominal fat body. This endosymbiont is involved in nitrogen recycling and amino acid provision to its host. In this study, the genome of Blattabacterium sp. of Cryptocercus punctulatus (BCpu) was sequenced and compared with those of the symbionts of Blattella germanica and Periplaneta americana, BBge and BPam, respectively. The BCpu genome consists of a chromosome of 605.7 kb and a plasmid of 3.8 kb and is therefore approximately 31 kb smaller than the other two aforementioned genomes. The size reduction is due to the loss of 55 genes, 23 of which belong to biosynthetic pathways for amino acids. The …

0106 biological sciencesMaleMolecular Sequence DataCockroachesBiology010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundBlattabacteriumGenome SizeValineGeneticsEndophytesAnimalsAmino Acidsgenome reductionGenome sizeEcology Evolution Behavior and SystematicsAmino acid synthesisResearch Articles030304 developmental biology2. Zero hungerchemistry.chemical_classificationGenetics0303 health sciencesBlattabacteriumMethionineBacteroideteswood-feedingbiology.organism_classificationsymbiosisAmino acidchemistryBiochemistrymetabolic pathway lossFemaleIsoleucineLeucineGenome BacterialGenome Biology and Evolution
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Plastidial Glyceraldehyde-3-Phosphate Dehydrogenase Deficiency Leads to Altered Root Development and Affects the Sugar and Amino Acid Balance in Arab…

2009

[EN] Glycolysis is a central metabolic pathway that, in plants, occurs in both the cytosol and the plastids. The glycolytic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) catalyzes the conversion of glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate with concomitant reduction of NAD(+) to NADH. Both cytosolic (GAPCs) and plastidial (GAPCps) GAPDH activities have been described. However, the in vivo functions of the plastidial isoforms remain unresolved. In this work, we have identified two Arabidopsis (Arabidopsis thaliana) chloroplast/plastid-localized GAPDH isoforms (GAPCp1 and GAPCp2). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism, and steri…

0106 biological sciencesPhysiologyDehydrogenaseSerine biosynthesisPlant Science01 natural sciencesSerine03 medical and health scienceschemistry.chemical_compoundBiosynthesisArabidopsisThalianaBIOQUIMICA Y BIOLOGIA MOLECULARGeneticsArabidopsis thalianaGene-expressionGlyceraldehyde 3-phosphate dehydrogenase030304 developmental biology2. Zero hunger0303 health sciencesCrucial rolebiologybiology.organism_classificationIn-source leavesMolecular characterizationMetabolic pathwayMetabolismBiochemistrychemistryOxidative stressbiology.proteinNAD+ kinaseEscherichia-ColiPathway010606 plant biology & botanyPlant Physiology
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Membrane glycerolipid remodeling triggered by nitrogen and phosphorus starvation in Phaeodactylum tricornutum.

2014

International audience; Diatoms constitute a major phylum of phytoplankton biodiversity in ocean water and freshwater ecosystems. They are known to respond to some chemical variations of the environment by the accumulation of triacylglycerol, but the relative changes occurring in membrane glycerolipids have not yet been studied. Our goal was first to define a reference for the glycerolipidome of the marine model diatom Phaeodactylum tricornutum, a necessary prerequisite to characterize and dissect the lipid metabolic routes that are orchestrated and regulated to build up each subcellular membrane compartment. By combining multiple analytical techniques, we determined the glycerolipid profil…

0106 biological sciencesPhysiologyPlant ScienceThylakoids01 natural sciencesPhaeodactylum tricornutumTranscriptomeMGDGNutrientnutrient starvationLipids metabolismSettore BIO/04 - Fisiologia VegetaleDigalactosyldiacylglycerolPhospholipids0303 health sciencesbiologyNitrogen starvationmicroalgaeMonogalactosyldiacyglycerolPhosphorusArticlesAdaptation PhysiologicalBiochemistryThylakoidSulfoquinovosyldiacylglycerollipids (amino acids peptides and proteins)DGDGNitrogenchemistry.chemical_elementlipidsMembrane Lipids03 medical and health sciencesSQDG[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biology14. Life underwaterPhaeodactylum tricornutumTriglycerides030304 developmental biologyDiatomsMembranesGene Expression ProfilingPhosphorusfungiPhosphorus starvationGlycerolipidsLipid metabolismmetabolic pathwaybiology.organism_classificationMetabolic pathwayPhosphatidylcholineDiatomchemistryPhytoplanktonLipidomics010606 plant biology & botany
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Flower abscission in Vitis vinifera L. triggered by gibberellic acid and shade discloses differences in the underlying metabolic pathways

2015

Understanding abscission is both a biological and an agronomic challenge. Flower abscission induced independently by shade and gibberellic acid (GAc) sprays was monitored in grapevine (Vitis vinifera L.) growing under a soilless greenhouse system during two seasonal growing conditions, in an early and late production cycle. Physiological and metabolic changes triggered by each of the two distinct stimuli were determined. Environmental conditions exerted a significant effect on fruit set as showed by the higher natural drop rate recorded in the late production cycle with respect to the early cycle. Shade and GAc treatments increased the percentage of flower drop compared to the control, and …

0106 biological sciencesSucrosePlant Sciencelcsh:Plant cultureBiologyCarbohydrate metabolism01 natural sciences03 medical and health scienceschemistry.chemical_compoundAbscissionBotanylcsh:SB1-1110inflorescenceRaffinoseGibberellic acidOriginal Research030304 developmental biology2. Zero hungerchemistry.chemical_classification0303 health sciencesthinningfungifood and beveragesTricarboxylic acid15. Life on landmetabolomicsgrapevineabscissionabscission gibberellic acid grapevine inflorescence metabolomics shade thinningSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeMetabolic pathwaychemistryInflorescenceshadegibberellic acid010606 plant biology & botanyFrontiers in Plant Science
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Cross-Talk between ROS and Calcium in Regulation of Nuclear Activities

2010

International audience; Calcium and Reactive Oxygen Species (ROS) are acknowledged as crucial second messengers involved in the response to various biotic and abiotic stresses. However, it is still not clear how these two compounds can play a role in different signaling pathways leading the plant to a variety of processes such as root development or defense against pathogens. Recently, it has been shown that the concept of calcium and ROS signatures, initially discovered in the cytoplasm, can also be extended to the nucleus of plant cells. In addition, it has been clearly proved that both ROS and calcium signals are intimately interconnected. How this cross-talk can finally modulate the tra…

0106 biological sciences[SDV]Life Sciences [q-bio]chemistry.chemical_elementSignallingPlant ScienceBiologyCalciumModels Biological01 natural sciencesNucleus03 medical and health sciencesNuclear proteinCrosstalkMolecular Biology030304 developmental biologyCell NucleusCalcium metabolismchemistry.chemical_classification0303 health sciencesReactive oxygen speciesfungifood and beveragesROSCell biologyMetabolic pathwaychemistryCytoplasmSecond messenger systemCalciumSignal transductionReactive Oxygen SpeciesSignal Transduction010606 plant biology & botanyMolecular Plant
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